Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold494
Parameters: 2 7 7 80 10 50 1000
Length:  28234

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
832--980
27
5.5
27
84
3
147
27
15
28
28
1.96
832--980
55
2.7
54
81
4
156
27
15
28
28
1.96
8837--8987
27
5.6
27
84
4
187
27
13
27
31
1.94
8837--8987
55
2.8
55
87
5
200
27
13
27
31
1.94
8837--8987
82
1.8
82
87
2
223
27
13
27
31
1.94
13439--13543
25
4.2
24
72
16
72
38
19
25
17
1.93
13418--13568
49
3.1
50
77
8
139
34
20
25
19
1.96
13452--13642
74
2.6
74
81
2
222
35
20
27
16
1.94
13452--13664
25
8.6
25
75
7
168
35
20
27
16
1.94
14534--14563
14
2.2
14
94
5
53
20
13
0
66
1.24
17355--17422
29
2.3
29
85
5
93
27
30
13
27
1.94
17244--17571
173
1.9
174
92
1
550
31
24
14
30
1.95
17524--17602
29
2.7
30
82
13
110
29
30
15
25
1.96
17244--17596
174
2.0
174
88
2
530
31
24
14
30
1.94
23086--23244
45
3.5
44
80
5
169
42
15
21
21
1.89
23194--23847
325
2.0
325
97
0
1227
37
12
25
24
1.90
25893--25975
26
3.2
27
80
8
93
39
14
9
36
1.79
26508--26537
16
1.9
16
93
6
53
30
0
20
50
1.49

Tables:   1

The End!