Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3243
Parameters: 2 7 7 80 10 50 1000
Length:  38404

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5942--5988
20
2.3
20
85
0
67
29
36
12
21
1.91
7511--7544
11
3.4
10
88
11
52
91
0
5
2
0.51
7479--7551
18
4.0
18
72
1
65
79
2
10
6
1.02
10331--10377
20
2.3
20
85
0
67
29
36
12
21
1.91
14915--15011
30
3.2
30
71
8
90
27
15
28
27
1.96
15024--15333
155
2.0
155
92
1
514
22
18
31
26
1.97
19000--19057
18
3.2
18
77
15
57
65
1
25
6
1.27
19715--19758
14
3.2
14
83
3
54
38
9
43
9
1.68
19730--19769
14
2.9
13
88
7
53
47
7
35
10
1.65
22260--22313
12
4.6
12
73
17
51
12
24
0
62
1.30
22251--22302
23
2.3
22
75
21
54
9
23
1
65
1.32
23616--23641
6
4.3
6
100
0
52
84
0
0
15
0.62
27880--27981
30
3.4
30
72
2
89
27
13
28
30
1.94
27873--27915
19
2.3
19
80
8
52
23
16
30
30
1.96

Tables:   1

The End!