Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3595
Parameters: 2 7 7 80 10 50 1000
Length:  58178

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5456--5520
28
2.3
28
91
0
103
32
27
7
32
1.85
5626--5688
28
2.2
29
88
8
94
22
22
23
31
1.98
5636--5699
28
2.2
28
86
2
83
25
25
18
31
1.98
13986--14215
39
5.8
39
80
5
162
29
28
21
20
1.98
14101--14220
39
3.1
39
86
7
172
30
31
20
16
1.95
14293--14365
28
2.6
28
80
0
101
30
21
8
39
1.83
20608--20791
39
4.7
39
81
5
169
27
28
22
21
1.99
20604--20791
40
4.8
39
79
4
173
28
28
22
20
1.99
32891--32931
17
2.4
17
91
0
64
58
0
9
31
1.31
32891--32931
8
4.8
9
82
8
50
58
0
9
31
1.31
33786--33868
43
1.9
43
80
9
98
25
15
24
34
1.95
35509--35561
28
1.9
28
84
3
72
20
33
26
18
1.96
38315--38415
41
2.5
41
83
0
121
25
26
22
24
2.00
51308--51490
39
4.7
40
79
8
189
24
21
27
27
1.99
56951--57098
72
2.1
68
90
5
224
31
29
16
22
1.96
56951--57135
72
2.6
70
84
9
223
31
30
17
20
1.95
57111--57162
26
2.0
26
96
0
95
28
34
23
13
1.92
57017--57237
102
2.2
103
90
4
349
31
31
18
18
1.95

Tables:   1

The End!