Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3174
Parameters: 2 7 7 80 10 50 1000
Length:  36960

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7142--7231
43
2.1
44
87
2
128
37
18
17
25
1.93
7611--7777
86
1.9
86
83
1
217
37
21
20
20
1.95
9908--9946
20
2.0
20
89
0
60
30
10
5
53
1.56
9959--10026
25
2.6
26
77
11
68
30
7
4
57
1.46
11136--11233
33
3.0
33
84
3
117
22
9
33
34
1.86
11132--11269
33
4.2
31
75
12
116
25
8
32
33
1.86
11245--11277
17
1.9
17
93
0
57
24
6
33
36
1.80
15141--15193
20
2.8
18
81
10
61
52
0
3
43
1.19
15148--15196
20
2.5
20
86
0
71
51
0
4
44
1.20
15207--15284
33
2.4
32
81
12
88
46
20
7
25
1.77
15286--15324
20
2.0
20
89
0
60
43
12
10
33
1.77
17947--17985
19
2.0
20
90
5
62
25
0
28
46
1.53
18771--18817
19
2.5
19
100
0
94
48
10
21
19
1.78
20003--20233
127
1.8
127
85
5
324
33
18
17
30
1.94
21036--21069
3
11.3
3
100
0
68
67
0
0
32
0.91
27651--27684
16
2.2
15
89
5
50
64
0
0
35
0.94
28139--28180
18
2.3
19
91
4
68
57
0
4
38
1.20
28505--28572
25
2.8
24
82
12
77
55
1
0
42
1.08
31565--31603
21
1.9
20
85
15
53
38
0
10
51
1.36
33805--33953
39
3.9
38
89
2
190
48
5
14
30
1.66
34665--34702
18
2.1
18
85
9
51
34
5
5
55
1.45

Tables:   1

The End!