Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2951
Parameters: 2 7 7 80 10 50 1000
Length:  31463

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
619--672
13
3.7
14
86
13
74
62
3
12
20
1.45
621--672
16
3.5
15
87
12
72
65
3
11
19
1.40
634--672
17
2.3
17
95
0
69
66
5
10
17
1.39
3629--3681
23
2.4
22
76
20
56
9
18
1
69
1.25
7392--7438
20
2.3
20
85
0
67
21
12
36
29
1.91
13917--14022
48
2.2
48
85
9
137
14
24
1
59
1.45
15039--15111
30
2.6
28
76
18
78
5
16
4
73
1.17
15205--15233
10
2.7
11
94
5
51
6
3
6
82
0.93
16629--16675
20
2.3
20
85
0
67
21
12
36
29
1.91
21568--21607
13
3.1
13
85
0
62
70
2
7
20
1.24
21569--21602
12
2.8
12
90
4
50
79
2
2
14
0.97
21643--21684
16
2.6
16
100
0
84
66
4
11
16
1.40
25121--25155
17
2.1
17
100
0
70
42
22
22
11
1.85
25988--26050
21
3.0
21
88
2
90
30
3
33
33
1.74
26398--26431
17
2.0
17
100
0
68
23
23
11
41
1.87
28309--28362
23
2.4
22
77
20
58
9
20
1
68
1.27

Tables:   1

The End!