Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2131
Parameters: 2 7 7 80 10 50 1000
Length:  34166

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1400--1482
28
2.9
28
81
1
67
36
10
24
28
1.89
1417--1482
28
2.3
28
84
2
87
39
9
22
28
1.85
1555--1799
39
6.5
39
90
6
355
17
20
30
31
1.96
1555--1799
77
3.2
77
89
7
353
17
20
30
31
1.96
7958--8022
28
2.3
28
81
0
85
40
9
21
29
1.84
8094--8306
39
5.5
39
91
4
324
17
20
30
31
1.96
10501--11100
47
12.6
49
92
2
935
29
28
8
33
1.87
10501--11100
192
3.1
192
93
1
992
29
28
8
33
1.87
22643--22679
5
7.8
5
85
11
51
83
0
2
13
0.74
22643--22679
9
3.9
10
82
10
51
83
0
2
13
0.74
24861--25045
79
2.3
81
81
8
218
25
28
22
23
1.99
24842--25045
40
5.1
40
81
8
229
25
27
22
24
1.99
26169--26288
56
2.1
56
95
0
222
22
22
10
45
1.82
30165--30338
40
4.5
39
77
12
162
24
27
22
25
2.00
30191--30339
76
1.9
77
80
6
169
24
26
22
25
2.00

Tables:   1

The End!