Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2327
Parameters: 2 7 7 80 10 50 1000
Length:  31303

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
496--662
46
3.7
46
73
20
172
28
28
20
21
1.98
501--666
88
1.8
92
91
6
277
28
29
21
21
1.98
1135--1194
30
2.0
30
90
0
93
30
25
8
36
1.85
7601--7768
46
3.7
46
70
20
156
30
27
20
22
1.98
7694--7779
46
1.9
45
85
4
120
31
29
18
20
1.97
10931--10964
17
2.1
17
88
5
52
73
17
0
8
1.08
11665--11762
41
2.4
42
86
3
121
46
2
20
30
1.62
11686--11768
41
2.0
41
100
0
166
43
4
21
30
1.73
17021--17146
27
4.6
27
82
7
139
42
22
8
26
1.82
17103--17351
27
9.3
27
82
8
240
36
18
18
26
1.94
17049--17337
53
5.4
54
83
5
309
37
19
15
26
1.92
17076--17322
80
3.1
81
85
3
329
37
18
17
26
1.93
17072--17351
80
3.5
81
81
4
318
37
18
17
26
1.93
18001--18051
27
1.9
26
84
4
66
17
27
19
35
1.94
18091--18150
27
2.3
27
85
2
77
21
21
20
36
1.95
20203--20274
27
2.6
27
88
2
99
44
23
6
25
1.78
20258--20508
27
9.3
27
87
0
322
36
19
18
25
1.95
21158--21208
27
1.9
26
84
4
66
17
27
19
35
1.94

Tables:   1

The End!