Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1250
Parameters: 2 7 7 80 10 50 1000
Length:  20143

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1257--1429
47
3.7
45
76
11
179
28
27
21
23
1.99
4297--4467
93
1.8
93
96
0
315
28
28
21
21
1.99
4292--4464
46
3.7
46
78
13
210
28
27
21
21
1.99
4875--4934
30
2.0
30
90
0
93
30
25
8
36
1.85
7335--7505
93
1.8
93
96
0
315
28
28
21
21
1.99
7330--7502
46
3.7
46
78
13
210
28
27
21
21
1.99
7918--7977
30
2.0
30
90
0
93
30
23
8
38
1.84
11430--11514
24
3.5
24
96
0
152
20
12
30
36
1.90
11430--11536
24
4.5
24
91
0
79
22
12
29
35
1.90
11430--11545
48
2.4
48
83
0
133
23
11
29
36
1.89
11430--11566
72
1.9
72
83
0
175
23
12
29
35
1.91
17759--17792
17
2.0
17
94
0
59
55
0
5
38
1.24
18959--19070
24
4.7
24
80
0
116
23
12
30
33
1.92

Tables:   1

The End!