Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3665
Parameters: 2 7 7 80 10 50 1000
Length:  37453

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
910--969
29
2.1
29
93
0
102
45
15
8
31
1.75
6266--6330
20
3.3
19
73
16
51
38
16
21
23
1.93
11557--11629
29
2.5
29
95
0
128
45
13
9
31
1.76
13714--13755
14
2.9
14
85
7
57
16
2
2
78
0.96
14303--14339
14
2.6
15
83
8
51
35
8
5
51
1.55
15235--15289
12
4.7
12
95
4
103
78
7
0
14
0.96
15235--15289
23
2.3
24
96
3
103
78
7
0
14
0.96
15331--15368
17
2.3
17
95
4
69
65
5
10
18
1.41
16914--16968
20
2.7
19
86
10
74
27
29
14
29
1.95
18965--19008
11
3.9
11
96
3
79
75
6
0
18
1.02
18965--19006
12
3.6
12
93
6
77
78
7
0
14
0.95
21529--21583
20
2.8
20
88
0
83
25
29
16
29
1.97
23578--23607
11
2.7
11
100
0
60
80
6
0
13
0.91
26109--26163
20
2.8
20
88
0
83
25
29
16
29
1.97
37191--37251
23
2.7
23
71
21
56
65
6
0
27
1.17
37209--37234
4
6.5
4
100
0
52
76
0
0
23
0.78

Tables:   1

The End!