Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2546
Parameters: 2 7 7 80 10 50 1000
Length:  25968

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1981--2339
27
13.3
27
81
1
355
39
18
9
31
1.84
1981--2282
134
2.2
135
84
2
358
40
18
9
32
1.82
2033--2376
134
2.6
135
79
4
347
39
19
9
31
1.83
2359--2535
27
6.6
27
88
0
246
35
19
20
24
1.96
2980--3044
22
3.0
22
82
8
87
20
21
24
33
1.97
3202--3276
27
2.8
27
82
9
84
20
24
18
37
1.94
3439--3572
6
21.8
6
74
15
105
20
17
15
46
1.84
3416--3526
31
3.5
31
93
1
186
19
16
14
49
1.79
3439--3561
37
3.5
37
86
6
141
20
17
15
46
1.84
3429--3563
31
4.2
31
85
10
153
20
18
14
46
1.84
3470--3570
37
2.7
37
90
0
148
18
18
15
46
1.84
6371--6610
119
2.0
120
95
0
428
29
18
20
32
1.96
12388--12482
40
2.4
40
87
3
129
22
24
29
24
1.99
17120--17155
6
6.5
6
81
18
51
86
0
13
0
0.58
17118--17156
10
3.9
10
83
9
53
84
0
15
0
0.62
18410--18640
40
5.8
40
94
2
376
21
23
29
25
1.99
21160--21430
93
2.9
94
92
1
456
30
10
18
40
1.84
21467--21524
24
2.4
24
85
5
73
20
15
29
34
1.94

Tables:   1

The End!