Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3179
Parameters: 2 7 7 80 10 50 1000
Length:  40343

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2562--2632
31
2.3
31
82
7
90
32
22
21
23
1.98
3120--3166
24
2.0
24
91
0
76
31
12
17
38
1.87
3108--3246
27
5.3
26
77
11
124
30
12
16
41
1.85
3132--3272
27
5.4
26
74
8
99
30
10
17
41
1.83
6254--6458
39
5.3
38
87
9
274
25
23
27
22
2.00
13260--13295
14
2.6
14
95
0
63
13
16
5
63
1.47
14183--14399
39
5.6
40
89
7
306
27
22
28
21
1.99
21240--21385
40
3.7
40
96
1
262
26
23
26
23
2.00
29298--29450
39
3.8
41
84
11
167
18
27
26
27
1.98
36745--36915
41
4.2
40
86
9
179
21
27
22
28
1.99
36745--36934
82
2.3
79
80
11
197
20
27
24
28
1.99
37845--37873
12
2.4
12
100
0
58
62
6
17
13
1.52
38246--38284
12
3.2
12
85
7
51
10
17
0
71
1.12

Tables:   1

The End!