Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2771
Parameters: 2 7 7 80 10 50 1000
Length:  49767

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1345--1568
40
5.7
40
83
5
240
25
27
21
25
1.99
1345--1568
79
2.8
78
81
4
252
25
27
21
25
1.99
1500--1577
40
1.9
41
82
10
97
26
28
20
24
1.99
9222--9444
40
5.7
40
82
7
233
25
27
20
26
1.99
9222--9444
79
2.8
76
80
9
241
25
27
20
26
1.99
9376--9453
40
1.9
41
82
10
97
26
28
20
24
1.99
28302--28448
43
3.4
44
73
12
117
28
19
24
27
1.98
35541--35636
42
2.3
42
80
10
115
29
19
21
29
1.98
37001--37053
22
2.5
22
87
3
72
16
37
32
13
1.88
42432--42559
29
4.5
28
88
2
175
32
25
12
28
1.92
42431--42559
57
2.3
57
87
2
188
32
26
12
28
1.92

Tables:   1

The End!