Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3267
Parameters: 2 7 7 80 10 50 1000
Length:  24835

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4037--4205
93
1.8
91
89
5
268
27
30
21
20
1.98
4029--4202
46
3.8
46
76
17
182
28
30
20
20
1.98
4034--4221
46
4.1
46
70
17
115
28
30
20
20
1.98
4295--4340
23
2.0
23
100
0
92
39
21
17
21
1.93
4640--4699
30
2.0
30
90
0
93
30
25
8
36
1.85
11373--11543
93
1.8
93
94
0
306
21
21
29
27
1.99
11377--11548
46
3.7
46
79
13
208
22
21
28
27
1.99
15315--15492
27
6.6
27
74
6
119
28
16
26
29
1.97
15312--15492
82
2.2
81
81
4
204
28
16
25
29
1.97
23347--23416
27
2.6
27
82
8
81
32
17
27
22
1.96
23398--23477
25
3.1
25
78
8
79
27
16
26
30
1.97
23317--23495
80
2.2
80
81
4
200
28
16
25
29
1.97

Tables:   1

The End!