Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3640
Parameters: 2 7 7 80 10 50 1000
Length:  31085

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6050--6234
40
4.7
40
76
6
162
25
27
21
25
1.99
8558--8628
24
2.8
25
75
8
72
67
1
19
11
1.29
8558--8656
12
8.6
12
65
20
50
67
1
19
12
1.27
8611--8659
17
2.7
18
81
9
64
67
0
18
14
1.23
8591--8657
29
2.4
27
85
9
91
70
0
17
11
1.17
8674--8736
33
1.9
33
84
12
85
53
6
26
12
1.62
10514--10567
20
2.7
20
82
0
63
24
20
18
37
1.94
10514--10587
30
2.5
30
86
8
98
21
20
18
39
1.93
10514--10578
20
3.2
20
71
16
53
23
21
16
38
1.93
14003--14059
24
2.4
25
85
5
73
33
24
10
31
1.89
14131--14169
17
2.2
18
90
4
62
43
12
5
38
1.65
24210--24252
21
2.1
20
86
4
59
46
23
18
11
1.82
27309--27361
23
2.4
22
76
20
56
9
18
1
69
1.25
30637--30675
11
3.5
11
92
0
60
71
7
2
17
1.21

Tables:   1

The End!