Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2581
Parameters: 2 7 7 80 10 50 1000
Length:  49048

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11008--11037
11
2.6
12
89
10
53
60
26
0
13
1.34
12982--13033
26
2.0
26
92
0
86
28
34
21
15
1.94
12994--13144
71
2.1
72
89
4
227
31
29
15
23
1.96
13063--13274
104
2.0
104
92
1
354
31
31
18
18
1.96
13615--13678
30
2.2
29
81
10
76
29
28
6
35
1.82
13622--13678
30
1.9
30
85
3
80
29
24
7
38
1.82
20938--20997
27
2.3
26
85
2
75
35
20
23
21
1.96
21040--21091
27
2.0
26
88
3
77
32
17
28
21
1.96
21716--21888
27
6.4
27
79
4
107
26
18
16
38
1.92
21734--22126
81
4.9
81
74
12
270
27
13
20
37
1.91
21869--22073
27
7.6
27
86
2
259
29
9
22
39
1.85
22062--22126
27
2.4
27
86
0
85
26
13
20
40
1.89
21842--22077
54
4.4
54
82
5
262
28
11
21
38
1.88
21717--22119
54
7.5
54
72
13
197
27
14
19
38
1.91
26794--26819
12
2.2
12
100
0
52
42
15
19
23
1.89
29237--29326
29
3.1
28
82
4
99
26
30
16
26
1.97
33637--33697
29
2.1
28
88
8
88
27
26
14
31
1.95
34796--34893
49
2.0
49
100
0
196
30
28
22
18
1.97
35628--35824
94
2.1
94
94
2
342
41
19
12
26
1.87
36314--36484
39
4.6
40
84
12
222
26
26
23
23
2.00
44141--44317
40
4.5
39
88
3
221
26
28
22
23
1.99

Tables:   1

The End!