Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3498
Parameters: 2 7 7 80 10 50 1000
Length:  51648

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11325--11352
14
2.0
14
100
0
56
14
14
0
71
1.15
11349--11422
6
13.2
6
78
18
72
33
1
17
47
1.56
11350--11426
11
7.5
11
79
15
94
33
1
18
46
1.57
11344--11422
30
2.6
30
83
13
99
32
2
16
48
1.60
11364--11425
5
12.0
5
76
17
56
33
1
17
46
1.58
11350--11426
20
3.8
21
83
16
108
33
1
18
46
1.57
19595--19656
32
1.9
32
96
0
115
38
22
9
29
1.86
23774--23817
22
2.0
22
100
0
88
54
4
22
18
1.61
26042--26085
21
2.1
21
83
8
54
63
2
9
25
1.35
35999--36026
13
2.2
13
100
0
56
50
14
7
28
1.69
43302--43363
32
1.9
32
96
0
115
29
9
22
38
1.86
51533--51606
6
13.2
6
76
21
72
47
17
1
33
1.56
51530--51591
5
12.0
5
76
17
56
46
17
1
33
1.58
51529--51605
11
7.5
11
79
15
94
46
18
1
33
1.57
51529--51605
20
3.8
21
83
16
108
46
18
1
33
1.57
51603--51631
15
1.9
15
100
0
58
72
0
13
13
1.13

Tables:   1

The End!