Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1884
Parameters: 2 7 7 80 10 50 1000
Length:  34020

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--217
14
2.0
15
93
6
51
62
17
0
20
1.33
986--1207
48
4.6
48
76
5
198
23
30
19
26
1.98
3756--3825
28
2.5
27
78
15
79
30
30
12
27
1.93
10200--10250
26
2.0
26
88
0
75
29
17
29
23
1.97
13532--14117
292
2.0
292
97
0
1111
37
20
19
23
1.95
15698--15882
79
2.3
81
83
9
229
24
22
27
25
2.00
15699--15882
40
4.6
40
82
9
207
25
22
27
25
2.00
15751--15915
79
2.1
79
84
6
210
26
21
26
25
1.99
17396--17457
31
2.0
32
83
3
81
35
17
25
20
1.95
17403--17543
67
2.0
67
85
5
183
32
21
27
18
1.96
17473--17524
27
2.0
26
84
3
68
34
21
26
17
1.95
21145--21416
39
7.0
39
93
0
436
22
25
28
23
1.99
24793--24979
39
4.7
39
86
7
168
25
22
27
24
2.00
24793--25016
79
2.8
79
82
11
253
25
22
27
25
2.00
24793--25016
40
5.7
40
86
6
271
25
22
27
25
2.00
32618--32830
37
5.7
37
81
13
190
25
21
27
25
1.99
32618--32794
75
2.4
74
81
11
202
25
21
27
25
1.99
32618--32830
39
5.6
39
82
10
221
25
21
27
25
1.99

Tables:   1

The End!