Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1517
Parameters: 2 7 7 80 10 50 1000
Length:  35560

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4967--5018
27
2.0
26
84
3
68
17
26
21
34
1.95
4948--5086
68
2.1
67
87
1
197
18
28
22
30
1.97
5054--5113
27
2.3
26
85
2
75
21
23
20
35
1.96
11515--11566
27
2.0
26
84
3
68
17
26
21
34
1.95
11604--11663
27
2.3
27
85
2
77
21
23
20
35
1.96
17156--17315
40
4.1
40
91
1
261
26
31
21
21
1.98
26021--26278
40
6.5
40
93
1
412
25
28
22
22
1.99
34155--34354
39
5.0
40
85
7
248
26
28
22
23
1.99
34171--34336
80
2.1
80
89
4
255
26
28
22
22
1.99

Tables:   1

The End!