Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1519
Parameters: 2 7 7 80 10 50 1000
Length:  40358

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2887--2950
27
2.4
27
78
0
74
39
20
18
21
1.93
4165--4220
27
2.1
27
86
0
76
42
19
17
19
1.89
4673--4848
54
3.3
51
72
10
138
29
13
19
37
1.90
4673--4846
27
6.4
27
70
13
117
29
13
19
37
1.90
6318--6488
27
6.3
27
72
10
82
32
11
18
37
1.87
7955--8130
54
3.3
52
73
10
158
29
11
21
36
1.89
7955--8130
27
6.5
27
73
10
128
29
11
21
36
1.89
8299--8323
10
2.5
10
100
0
50
20
52
12
16
1.75
9093--9143
27
2.0
26
84
7
68
41
17
19
21
1.91
9601--9772
27
6.4
27
74
10
104
31
11
18
38
1.86
9601--9755
54
2.9
55
76
7
165
34
10
16
38
1.82
10723--10788
27
2.4
27
79
0
78
39
21
21
18
1.93
11231--11400
27
6.4
26
70
14
89
31
12
19
37
1.89
11259--11346
26
3.3
26
72
17
74
32
11
15
39
1.84
24745--24922
27
6.6
27
84
3
205
29
28
15
26
1.96
24766--24921
82
1.9
81
88
3
233
29
28
15
26
1.96
32865--33042
27
6.6
27
84
3
205
29
28
15
26
1.96
32886--33041
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!