Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2048
Parameters: 2 7 7 80 10 50 1000
Length:  40602

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3145--3289
40
3.6
40
85
4
193
25
24
26
23
2.00
9938--10013
38
2.0
38
100
0
152
31
13
23
31
1.93
11200--11344
40
3.6
40
85
4
193
25
24
26
23
2.00
21750--21782
16
2.0
17
88
5
50
36
21
9
33
1.85
22365--22545
40
4.6
40
85
8
221
25
27
22
24
2.00
25926--26148
40
5.7
40
80
8
217
25
21
27
25
1.99
25967--26148
79
2.3
77
81
8
215
25
21
28
24
1.99
33092--33235
38
3.8
38
76
11
129
27
18
29
25
1.98

Tables:   1

The End!