Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold743
Parameters: 2 7 7 80 10 50 1000
Length:  34475

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
918--1117
45
4.3
46
90
7
296
36
14
22
27
1.93
852--1117
97
2.7
97
91
3
419
34
14
22
28
1.93
956--1117
51
3.2
51
86
11
237
36
14
22
25
1.93
1081--1225
37
4.0
37
92
3
242
36
16
22
24
1.94
1081--1225
73
2.0
72
93
1
245
36
16
22
24
1.94
2479--2645
58
3.0
58
87
10
237
22
13
31
32
1.92
2498--2588
28
3.2
28
66
22
80
25
15
31
27
1.95
2538--2680
48
2.9
49
91
2
225
23
13
30
32
1.94
5889--6090
46
4.3
48
89
6
272
35
14
21
28
1.93
5935--6090
51
3.1
51
84
10
223
35
14
22
27
1.93
5823--6090
97
2.7
97
93
1
455
34
14
22
28
1.93
6054--6199
37
4.0
37
93
1
242
36
16
21
24
1.94
10673--11123
44
10.5
43
71
12
243
31
21
21
26
1.98
10843--11124
87
3.3
83
86
7
343
30
22
21
25
1.99
11646--11675
15
1.9
16
93
6
53
46
46
0
6
1.29
12748--12777
3
10.0
3
100
0
60
33
0
0
66
0.92
24981--25078
49
2.0
49
88
4
144
30
7
12
50
1.67
25325--25430
44
2.5
41
75
18
108
33
30
3
32
1.76
25335--25426
44
2.0
46
89
4
143
34
29
4
31
1.77
25412--25463
16
3.2
16
86
0
68
25
28
3
42
1.72
30078--30335
80
3.3
79
81
4
270
25
20
28
25
1.99
30078--30335
40
6.5
40
83
4
238
25
20
28
25
1.99

Tables:   1

The End!