Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1987
Parameters: 2 7 7 80 10 50 1000
Length:  29417

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5514--5718
43
4.7
44
69
14
145
30
20
23
25
1.98
5505--6130
135
4.7
135
93
2
896
30
21
22
26
1.99
5647--5987
45
7.6
45
66
14
161
29
21
23
25
1.99
7726--7758
14
2.4
14
100
0
66
27
0
0
72
0.85
13727--13788
30
2.1
30
90
0
97
16
20
12
50
1.78
15661--15793
69
1.9
70
92
1
223
32
13
17
36
1.89
17571--17810
48
5.0
48
91
2
372
33
7
28
30
1.84
17571--17803
98
2.4
97
90
2
362
33
7
28
30
1.84
17946--18060
37
3.1
37
88
3
160
27
18
28
25
1.98
18882--18965
43
2.0
43
90
4
134
23
32
20
23
1.98
19226--19266
19
2.2
18
86
4
55
70
4
2
21
1.18
19192--19265
31
2.4
31
78
13
82
67
4
2
25
1.21
21700--21730
14
2.2
14
94
0
53
45
16
9
29
1.79
24177--24277
7
14.4
7
74
10
64
39
38
0
21
1.54
24309--24403
7
13.0
7
69
8
55
44
27
1
27
1.61
24316--24397
21
3.7
21
76
12
92
43
28
1
26
1.62
24300--24393
46
2.0
46
97
0
179
42
25
2
29
1.67
24309--24408
14
6.9
14
72
8
74
45
26
1
28
1.60
24566--24725
82
2.0
81
84
8
209
21
25
21
31
1.98
24566--24700
41
3.3
41
90
2
211
20
25
22
31
1.98

Tables:   1

The End!