Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2977
Parameters: 2 7 7 80 10 50 1000
Length:  30375

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5154--5273
56
2.1
56
98
0
231
45
9
23
22
1.81
6401--6585
40
4.7
40
82
9
218
24
22
28
25
1.99
6454--6618
79
2.1
79
82
8
194
26
20
27
25
1.99
13041--13160
56
2.1
56
98
0
231
45
9
23
22
1.81
14327--14424
38
2.5
38
85
5
106
27
21
27
23
1.99
14288--14424
40
3.5
40
80
10
140
25
22
27
24
2.00
14396--14451
27
2.1
27
86
6
78
28
23
23
25
1.99
18882--18958
40
1.9
40
84
5
102
29
25
23
20
1.99
20065--20177
56
2.0
58
93
6
198
46
8
22
22
1.78
21291--21475
79
2.3
81
84
7
236
24
22
27
25
2.00
21292--21475
40
4.6
40
83
9
216
24
22
27
25
2.00
21344--21508
79
2.1
79
84
6
210
26
21
27
25
1.99

Tables:   1

The End!