Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3736
Parameters: 2 7 7 80 10 50 1000
Length:  42113

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11226--11257
9
3.6
9
100
0
64
59
12
28
0
1.34
11226--11265
18
2.2
18
90
0
62
60
12
25
2
1.45
11712--11814
37
2.8
37
90
0
170
23
31
21
24
1.99
11955--12356
48
8.6
48
89
6
628
30
28
5
35
1.81
12152--12233
37
2.2
37
95
0
146
31
28
7
32
1.84
12104--12356
85
2.8
88
90
6
377
30
28
6
34
1.82
12060--12329
133
2.0
133
97
0
513
30
28
6
34
1.83
12008--12356
181
1.9
181
94
0
617
30
27
6
35
1.82
15557--15915
40
9.0
40
93
1
594
27
29
22
21
1.99
19394--19442
22
2.2
20
77
19
53
55
26
0
18
1.43
20221--20303
43
1.9
43
85
0
112
32
26
16
24
1.96
20232--20345
43
2.7
43
79
5
106
31
24
17
26
1.97
22218--22295
34
2.3
34
89
10
115
19
23
8
48
1.76
29252--29403
27
5.6
27
93
3
241
30
28
13
26
1.94
29252--29403
55
2.8
55
94
0
259
30
28
13
26
1.94
37256--37407
27
5.6
27
93
3
241
30
28
13
26
1.94
37256--37407
55
2.8
55
94
0
259
30
28
13
26
1.94
40070--40285
39
5.4
38
77
11
175
25
26
20
26
1.99
40069--40285
79
2.7
78
77
5
195
26
26
20
26
1.99
40223--40300
40
1.9
42
82
10
99
28
26
20
24
1.99

Tables:   1

The End!