Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3501
Parameters: 2 7 7 80 10 50 1000
Length:  39339

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2098--2227
45
2.9
45
81
0
134
44
13
19
23
1.85
3254--3297
17
2.6
17
92
0
70
29
22
22
25
1.99
12472--12542
35
2.0
35
94
0
124
59
15
4
21
1.53
13506--13648
3
48.7
3
72
15
104
63
1
6
28
1.27
13542--13639
20
4.9
20
75
12
76
62
2
6
29
1.31
13540--13647
23
4.9
23
77
10
91
62
1
5
29
1.28
13669--13732
21
3.0
21
77
4
67
64
3
9
23
1.38
18168--18196
10
3.0
10
95
5
51
0
10
10
79
0.94
21893--22430
44
11.7
44
73
13
343
28
21
17
32
1.96
21893--22430
89
5.8
88
72
14
284
28
21
17
32
1.96
22055--22430
51
7.9
51
69
12
192
29
20
16
32
1.95

Tables:   1

The End!