Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold708
Parameters: 2 7 7 80 10 50 1000
Length:  40114

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
824--899
40
1.9
40
86
0
107
25
23
28
22
1.99
837--922
40
2.1
40
89
2
127
26
23
27
22
1.99
8734--8958
40
5.7
40
81
6
224
24
28
21
25
1.99
8701--8958
40
6.5
38
78
9
200
24
27
21
26
1.99
8890--8967
40
1.9
41
82
10
97
26
28
20
24
1.99
13469--13496
4
7.0
4
100
0
56
25
0
0
75
0.81
14392--14454
21
3.0
21
88
2
90
30
3
33
33
1.74
16521--16568
21
2.4
20
82
6
53
6
12
4
77
1.11
16533--16562
13
2.3
13
100
0
60
0
13
6
80
0.91
16541--16612
19
3.8
19
73
20
53
5
18
1
75
1.07
16589--16617
15
1.9
15
100
0
58
6
20
0
72
1.07
17301--17363
21
3.0
21
88
6
83
28
6
33
31
1.82
20026--20213
45
4.2
45
94
0
313
25
20
15
37
1.93
33906--33935
12
2.4
13
94
5
53
76
6
3
13
1.11
33973--34009
12
3.0
12
92
7
65
59
0
16
24
1.37
33973--34010
13
3.0
13
96
3
69
60
0
15
23
1.35
35411--35457
20
2.3
20
85
0
67
21
12
36
29
1.91
38472--38553
18
4.6
18
74
6
76
17
26
3
52
1.61

Tables:   1

The End!