Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1683
Parameters: 2 7 7 80 10 50 1000
Length:  46685

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2057--2232
40
4.5
37
76
13
158
25
27
21
25
1.99
2057--2235
39
4.6
40
78
14
153
25
26
22
25
2.00
7694--7944
78
3.2
78
90
5
361
25
23
26
23
2.00
7694--7914
40
5.6
40
91
5
353
24
23
27
24
2.00
7694--7914
118
1.9
118
91
5
367
24
23
27
24
2.00
15856--16111
40
6.5
40
84
5
308
26
23
26
23
2.00
15856--16111
119
2.2
119
85
7
335
26
23
26
23
2.00
24570--24635
29
2.3
29
86
2
89
28
15
27
28
1.96
35175--35209
15
2.3
15
100
0
70
20
11
37
31
1.88
36043--36078
8
4.5
8
86
13
56
47
41
0
11
1.39
37473--37591
29
4.2
28
78
4
121
28
15
27
27
1.97
39326--39509
40
4.6
39
83
6
194
24
21
27
26
1.99

Tables:   1

The End!