Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2043
Parameters: 2 7 7 80 10 50 1000
Length:  34173

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7218--7368
27
5.6
27
74
9
119
28
16
27
27
1.97
7272--7341
28
2.6
27
86
2
86
28
20
28
22
1.98
7217--7368
54
2.8
53
80
5
171
28
16
26
27
1.97
12089--12276
40
4.7
40
93
3
326
25
22
27
24
2.00
12089--12309
80
2.8
80
88
6
326
26
22
27
23
2.00
20150--20337
40
4.7
40
90
3
290
26
23
26
23
2.00
20150--20360
80
2.7
80
89
4
313
27
23
26
23
2.00
21901--23257
47
28.6
47
95
1
2257
29
28
8
33
1.87
22589--22664
22
3.3
22
64
10
62
28
27
10
32
1.90
24530--24557
8
3.5
8
100
0
56
46
14
14
25
1.82
24848--24872
13
1.9
13
100
0
50
36
16
16
32
1.90
26830--27010
80
2.3
80
83
9
219
27
27
20
23
1.99
26827--27010
40
4.6
40
81
7
196
28
27
20
23
1.99

Tables:   1

The End!