Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1590
Parameters: 2 7 7 80 10 50 1000
Length:  28657

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5946--6051
42
2.5
43
87
1
151
17
32
33
16
1.93
5929--6051
42
2.9
41
81
4
147
17
32
33
17
1.93
6524--6692
42
4.0
42
83
5
196
17
29
33
19
1.95
6763--6842
30
2.5
33
84
11
96
37
16
22
23
1.93
12178--12251
24
3.1
24
82
3
78
10
39
31
18
1.86
12191--12255
23
2.8
24
80
4
78
12
40
30
16
1.86
12354--13100
42
17.6
42
83
5
878
15
28
35
20
1.93
12350--13100
85
8.9
84
85
4
922
15
28
35
20
1.93
12353--13100
211
3.5
212
84
4
992
15
28
35
20
1.93
21197--21341
42
3.4
42
89
0
200
17
33
31
17
1.94
21814--21979
42
3.9
42
82
5
199
18
30
32
18
1.95
27088--27756
43
15.7
43
85
2
843
20
36
27
14
1.92
27088--27756
85
7.9
85
85
1
842
20
36
27
14
1.92
27088--27756
127
5.2
127
85
2
876
20
36
27
14
1.92
27851--27927
24
3.3
24
80
5
86
18
29
41
10
1.83
28138--28243
43
2.5
42
78
7
124
18
27
29
24
1.98

Tables:   1

The End!