Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3263
Parameters: 2 7 7 80 10 50 1000
Length:  29998

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1055--1164
52
2.1
52
91
8
181
40
14
14
30
1.86
917--1255
171
2.0
169
82
12
408
38
18
15
27
1.91
1137--1299
68
2.4
68
86
5
215
34
23
15
25
1.94
9522--9552
15
2.0
16
93
6
55
41
6
25
25
1.79
13544--13631
3
30.0
3
69
17
51
62
3
3
30
1.28
13584--13648
26
2.5
26
76
14
71
60
1
0
38
1.07
20728--20767
20
2.0
20
100
0
80
45
20
20
15
1.86
22976--23000
7
3.6
7
100
0
50
28
0
0
72
0.86
22951--23018
34
1.9
37
88
8
106
39
1
5
52
1.34
22958--23035
34
2.3
34
78
12
88
42
0
6
51
1.27
24220--24286
18
3.6
18
73
11
53
43
5
11
38
1.66
24210--24356
39
3.8
39
86
0
204
40
9
12
37
1.75
24210--24360
78
1.9
78
91
0
248
40
9
12
37
1.75
26476--26540
26
2.5
26
76
14
71
60
1
0
38
1.07
27127--27196
34
2.1
34
97
2
133
21
25
27
25
1.99
28601--28736
54
2.5
55
87
8
192
31
16
16
35
1.91
28785--29177
68
5.5
71
82
8
401
29
17
21
32
1.96

Tables:   1

The End!