Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2296
Parameters: 2 7 7 80 10 50 1000
Length:  41282

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5833--6056
40
5.6
40
80
6
231
25
23
27
23
2.00
5835--6056
79
2.8
80
82
3
259
25
23
27
23
2.00
9962--10005
22
2.0
22
82
8
54
38
13
18
29
1.89
10232--10453
40
5.6
40
90
1
322
29
26
21
22
1.99
18765--18940
46
3.8
46
80
4
228
21
21
28
27
1.99
18761--18932
93
1.8
93
94
0
308
21
22
29
26
1.99
20302--20340
10
3.8
10
93
6
69
33
17
17
30
1.94
20301--20340
21
1.9
21
100
0
80
35
17
17
30
1.93
24380--24429
24
2.1
24
84
0
64
34
24
2
40
1.66
32674--32773
51
2.0
51
88
4
148
23
14
27
36
1.93

Tables:   1

The End!