Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1224
Parameters: 2 7 7 80 10 50 1000
Length:  31074

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17--163
43
3.4
43
94
2
251
25
35
14
23
1.94
2022--2100
37
2.1
37
90
0
122
25
31
18
24
1.98
2216--2434
47
4.7
47
96
2
406
29
30
8
31
1.87
4134--4248
40
2.8
40
85
3
151
33
15
10
40
1.82
4969--5002
17
2.0
17
94
0
59
50
20
5
23
1.70
5173--5216
13
3.2
13
81
9
52
2
22
4
70
1.17
5167--5217
19
2.8
20
77
14
56
1
21
5
70
1.18
5398--5428
8
3.9
8
100
0
62
61
0
0
38
0.96
5941--6317
91
4.1
91
75
8
318
35
5
20
38
1.77
5903--6323
68
6.1
69
75
8
284
35
5
20
38
1.77
5941--6345
23
17.7
23
75
6
320
35
5
20
39
1.76
6980--7184
85
2.4
85
81
3
207
29
17
25
27
1.97
7064--7231
85
2.0
86
87
1
248
27
16
27
28
1.97
7049--7243
43
4.6
43
78
6
209
27
16
26
29
1.97
16381--16508
55
2.3
55
81
7
152
23
28
30
17
1.97
24610--24793
40
4.6
40
82
6
196
23
20
27
28
1.99
24610--24790
80
2.3
81
83
9
221
23
20
27
27
1.99
24691--24840
40
3.8
38
80
10
131
25
22
28
24
1.99

Tables:   1

The End!