Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold325
Parameters: 2 7 7 80 10 50 1000
Length:  15272

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
605--1043
41
10.9
41
85
6
524
31
21
20
26
1.98
1368--1422
20
2.7
21
83
10
69
3
43
20
32
1.69
1366--1435
21
3.4
21
80
4
79
2
44
18
34
1.65
6883--7173
7
34.0
9
63
33
87
33
0
20
46
1.51
6928--7321
26
15.8
25
89
5
561
32
0
20
46
1.53
7242--7285
18
2.4
18
92
0
79
34
2
18
45
1.62
7319--7614
73
4.1
73
99
0
583
40
6
1
50
1.39
7761--7831
13
5.5
13
86
0
106
50
2
7
39
1.44
7760--7831
26
2.8
26
100
0
144
50
2
6
40
1.44
7836--7993
17
8.6
17
77
20
149
40
1
12
45
1.50
7803--8002
57
3.5
57
97
0
364
43
2
11
43
1.51
9335--9374
11
3.7
11
93
3
64
27
27
10
35
1.89
10358--10558
84
2.4
83
93
2
330
29
17
19
32
1.95
10944--10969
12
2.2
12
100
0
52
19
34
7
38
1.80
11582--12169
112
5.3
112
93
1
975
26
29
19
25
1.98
11582--12169
223
2.6
223
93
0
1007
26
29
19
25
1.98
12117--12233
40
2.9
40
94
0
198
20
29
16
33
1.94
13796--13845
21
2.4
21
79
0
55
16
38
30
16
1.90

Tables:   1

The End!