Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2348
Parameters: 2 7 7 80 10 50 1000
Length:  26468

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2765--2850
39
2.1
44
85
10
119
33
9
26
30
1.88
2787--3109
43
7.4
44
70
23
158
33
12
27
26
1.93
10734--10916
79
2.3
81
84
7
232
24
22
27
25
2.00
10735--10918
40
4.6
40
83
9
216
23
22
28
25
2.00
10787--10951
79
2.1
79
84
6
210
25
21
27
25
1.99
19607--19685
37
2.1
37
88
4
115
25
30
18
25
1.98
19804--20432
47
13.4
47
96
0
1118
29
29
8
31
1.87
23407--23591
40
4.6
39
83
6
212
23
22
28
25
1.99
23407--23589
79
2.3
81
83
7
223
24
22
27
25
2.00
23460--23624
79
2.1
79
83
6
201
25
20
27
26
1.99
26274--26445
80
2.1
83
90
7
273
35
9
28
26
1.87

Tables:   1

The End!