Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2617
Parameters: 2 7 7 80 10 50 1000
Length:  43874

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3228--3273
12
3.6
12
81
16
56
19
10
0
69
1.17
3233--3275
15
3.1
14
84
15
63
23
13
0
62
1.31
3228--3271
14
3.2
14
87
12
65
18
9
0
72
1.10
8426--8470
20
2.2
22
80
15
60
24
28
17
28
1.97
10981--11023
21
2.1
21
91
4
70
30
23
11
34
1.90
12721--12757
16
2.2
17
90
4
58
81
2
8
8
0.97
12721--12775
15
3.6
15
82
7
58
72
3
9
14
1.23
16059--16097
14
2.8
14
92
0
60
76
5
2
15
1.06
16138--16183
12
3.7
12
88
11
74
67
0
10
21
1.21
16135--16183
26
1.9
26
95
4
91
63
0
12
24
1.29
26198--26241
22
2.0
22
95
0
79
25
36
4
34
1.76
26556--26587
13
2.6
12
95
5
55
84
0
3
12
0.74
28763--28810
22
2.2
22
85
3
62
58
2
25
14
1.48
28799--28849
26
2.0
26
100
0
102
58
5
19
15
1.57
28801--28862
26
2.4
26
86
5
81
66
4
17
11
1.40
28860--28901
20
2.1
20
86
0
57
52
2
30
14
1.54
32083--32126
22
2.0
22
95
0
79
25
36
4
34
1.76
36349--36534
40
4.7
40
85
5
200
26
20
26
26
1.99
36402--36567
80
2.1
79
80
9
178
28
19
26
25
1.99

Tables:   1

The End!