Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold534
Parameters: 2 7 7 80 10 50 1000
Length:  40237

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2216--2437
39
5.7
39
84
8
285
26
22
25
26
2.00
2216--2446
79
3.0
78
85
10
298
26
22
25
26
2.00
9527--9705
85
2.1
85
98
0
349
37
8
27
25
1.86
10869--11052
40
4.7
40
82
9
225
23
22
28
25
2.00
10869--11050
78
2.3
81
84
8
232
24
23
28
24
2.00
13422--13668
40
6.2
40
87
5
342
24
23
26
25
2.00
17804--17842
20
2.0
20
94
0
69
43
10
12
33
1.77
17804--17853
20
2.5
20
87
6
57
42
12
14
32
1.82
20795--20983
79
2.3
80
77
8
195
41
18
6
33
1.76
21108--21155
16
3.0
16
87
6
62
58
0
2
39
1.10
21128--21177
18
2.7
18
87
6
64
72
2
0
26
0.96
21128--21219
9
10.3
9
67
22
52
70
1
1
27
1.01
21137--21219
11
8.0
11
73
18
72
71
1
1
26
1.01
21137--21219
20
4.0
20
73
17
80
71
1
1
26
1.01
21403--21530
9
13.2
9
68
23
57
32
3
2
61
1.24
21407--21441
11
3.2
11
83
0
52
22
2
0
74
0.95
21403--21528
10
12.9
10
68
22
56
32
3
2
61
1.24
21403--21534
20
6.7
20
68
16
71
34
3
2
60
1.24
21450--21530
9
8.5
10
71
22
59
34
1
2
61
1.17
21479--21540
27
2.2
28
88
5
90
38
0
0
61
0.96
24369--24418
22
2.3
22
82
6
66
36
2
0
62
1.07
26040--26071
3
10.7
3
100
0
64
34
0
0
65
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29904--30048
40
3.7
40
93
3
240
22
21
29
26
1.99
29904--30094
40
4.8
40
87
5
237
21
21
30
26
1.98
29907--30093
79
2.3
80
83
7
229
21
21
30
26
1.98
38241--38431
40
4.8
41
89
3
248
21
21
30
26
1.98
38241--38430
79
2.4
80
84
5
242
21
21
31
25
1.98

Tables:   1

The End!