Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1953
Parameters: 2 7 7 80 10 50 1000
Length:  26691

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
873--979
40
2.7
40
94
0
178
31
27
20
20
1.97
8510--8653
39
3.7
39
95
3
247
31
29
19
19
1.96
8510--8653
79
1.8
77
94
2
252
31
29
19
19
1.96
12570--12678
49
2.3
47
93
4
182
30
30
7
32
1.85
12949--13006
24
2.5
23
81
16
66
32
5
0
62
1.18
15688--16025
40
8.5
40
85
4
375
25
28
21
24
1.99
15688--16023
118
2.8
118
82
5
347
25
28
21
24
1.99
16331--16409
29
2.7
29
86
5
106
27
32
15
24
1.95
16391--16493
43
2.4
43
100
0
206
26
35
15
22
1.94
18519--18627
49
2.3
47
93
4
182
30
30
7
32
1.85
18896--18953
24
2.5
23
81
16
66
32
5
0
62
1.18
21636--21975
40
8.5
40
85
2
375
25
28
21
24
1.99
22279--22357
29
2.7
29
86
5
106
27
32
15
24
1.95
22339--22441
43
2.4
43
100
0
206
26
35
15
22
1.94
24468--24576
49
2.3
47
93
4
182
30
30
7
32
1.85
24844--24901
24
2.5
23
81
16
66
32
5
0
62
1.18

Tables:   1

The End!