Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold401
Parameters: 2 7 7 80 10 50 1000
Length:  31601

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1452--1607
82
1.9
81
85
3
215
26
16
28
28
1.97
1451--1604
55
2.9
52
82
7
175
27
16
27
27
1.97
1452--1607
27
5.7
27
81
6
163
26
16
28
28
1.97
1444--1628
27
6.8
27
75
9
101
26
16
28
29
1.97
1444--1628
82
2.3
81
78
2
210
26
16
28
29
1.97
9349--9504
82
1.9
81
85
3
215
26
16
28
28
1.97
9348--9501
55
2.9
52
82
7
175
27
16
27
27
1.97
9349--9504
27
5.7
27
81
6
163
26
16
28
28
1.97
9341--9525
27
6.8
27
75
9
101
26
16
28
29
1.97
9341--9525
82
2.3
81
78
2
210
26
16
28
29
1.97
15069--15103
15
2.2
16
90
5
54
68
2
0
28
1.04
15069--15111
8
5.5
8
86
5
52
65
2
2
30
1.18
15069--15111
16
2.8
15
89
3
59
65
2
2
30
1.18
15257--15305
25
2.0
25
91
0
80
51
6
8
34
1.57
15340--15468
23
5.6
23
72
14
88
57
3
4
34
1.35
16003--16121
30
4.0
30
97
0
220
21
3
49
25
1.65
16621--17014
131
3.0
131
90
1
592
34
18
19
27
1.95
20798--21043
64
3.8
64
82
4
289
23
28
15
32
1.95
21574--21634
30
2.0
30
83
0
77
29
24
3
42
1.70
23163--23304
56
2.5
56
89
1
212
27
14
25
33
1.94
24820--24849
15
2.0
15
100
0
60
46
6
13
33
1.69
28523--28595
37
1.9
38
83
8
96
36
20
15
27
1.92

Tables:   1

The End!