Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2338
Parameters: 2 7 7 80 10 50 1000
Length:  41045

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4810--4896
18
4.8
18
84
5
95
32
25
11
31
1.91
4808--4896
36
2.5
36
88
0
133
31
24
12
31
1.92
10382--10455
24
3.1
24
71
9
80
52
4
1
41
1.28
10497--10543
22
2.2
21
84
3
58
25
8
0
65
1.20
11898--11939
19
2.2
19
83
8
50
40
2
0
57
1.12
16873--17113
119
2.0
119
100
0
482
15
17
20
46
1.84
17197--17245
22
2.2
23
85
3
64
57
2
6
34
1.35
17808--17850
19
2.4
18
84
7
52
32
6
6
53
1.55
18607--18648
18
2.4
19
80
15
54
50
2
4
42
1.36
18775--18819
22
2.0
24
86
8
67
44
8
2
44
1.47
23036--23087
27
1.9
27
84
0
68
28
7
9
53
1.61
32639--32686
21
2.3
21
78
7
53
14
20
25
39
1.91
32619--32670
24
2.2
24
82
6
61
5
21
28
44
1.75

Tables:   1

The End!