Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3207
Parameters: 2 7 7 80 10 50 1000
Length:  26372

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1006--1039
3
11.3
3
87
12
52
67
0
0
32
0.91
1152--1196
23
1.9
24
90
4
74
77
0
4
17
0.92
1247--1330
3
28.0
3
95
4
152
66
0
0
33
0.92
3198--3344
44
3.3
44
84
3
197
28
26
16
28
1.97
3319--3367
21
2.3
22
75
10
57
26
34
8
30
1.86
3281--3412
65
2.0
65
95
0
237
27
27
16
28
1.97
3549--3861
44
7.2
44
64
9
147
30
18
23
28
1.97
3431--3871
88
5.0
88
88
1
602
29
18
22
29
1.97
3926--4471
44
12.6
44
73
7
370
26
22
20
30
1.98
3876--4421
129
4.2
130
90
1
794
26
22
20
30
1.98
3880--4251
86
4.3
86
74
5
243
25
23
21
29
1.99
3926--4291
86
4.2
86
73
7
312
25
24
20
29
1.99
4432--4912
177
2.7
177
87
2
682
27
24
18
29
1.98
7500--7574
39
1.9
39
94
0
132
32
16
21
30
1.95
7548--7648
40
2.5
40
91
3
168
22
19
28
28
1.98
7548--7672
40
3.1
40
85
4
110
24
20
27
27
1.99
14446--14528
31
2.6
31
80
3
85
61
19
3
15
1.48
20387--20514
9
13.6
9
76
9
121
31
0
21
46
1.57
20387--20514
57
2.2
57
85
0
175
31
0
21
46
1.57
20633--21067
241
1.8
241
99
0
861
32
15
18
33
1.92
21189--21238
23
2.2
23
100
0
100
34
16
16
34
1.90
23723--23752
14
2.1
15
93
6
53
36
0
13
50
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25425--25514
43
2.0
45
82
4
112
38
25
6
28
1.81
25700--25765
28
2.4
27
84
5
78
27
0
21
51
1.48
26054--26333
40
7.2
39
80
11
254
23
18
24
33
1.97
26089--26229
72
1.9
74
84
7
189
25
17
25
31
1.97

Tables:   1

The End!