Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2961
Parameters: 2 7 7 80 10 50 1000
Length:  49870

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1672--1825
28
5.5
28
96
0
265
25
13
28
31
1.94
9836--9989
28
5.5
28
96
0
265
25
13
28
31
1.94
12257--12376
56
2.1
56
98
0
231
22
23
9
45
1.81
12994--13063
35
2.0
35
94
0
122
12
24
35
27
1.92
20445--20504
22
2.9
20
79
15
77
80
5
10
5
1.02
20445--20508
9
6.4
9
80
19
74
81
4
9
4
0.98
22839--22889
23
2.2
23
92
0
84
17
27
39
15
1.90
22839--22897
23
2.5
23
88
2
73
16
25
40
16
1.90
23411--23457
24
2.0
24
82
0
58
27
19
14
38
1.91
25711--25768
30
1.9
30
85
0
80
27
17
25
29
1.97
27407--27452
19
2.6
18
80
16
51
76
6
2
15
1.09
27409--27481
38
2.0
36
81
10
85
72
5
2
19
1.16
27472--27507
17
2.1
17
94
0
63
63
2
0
33
1.08
30060--30118
30
2.0
30
83
6
75
20
35
27
16
1.94
37016--37458
198
2.2
196
80
2
492
28
23
27
20
1.99
39730--39792
6
10.5
6
92
0
99
15
1
3
79
0.94
39742--39805
18
3.5
18
89
2
65
15
4
1
78
1.00
46957--47033
13
5.9
13
82
0
91
31
6
27
35
1.82
46957--47033
39
2.0
39
86
0
109
31
6
27
35
1.82
48522--48558
17
2.2
17
95
0
65
32
8
5
54
1.53

Tables:   1

The End!