Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold254
Parameters: 2 7 7 80 10 50 1000
Length:  33671

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1362--1580
39
5.6
40
84
8
227
24
20
27
26
1.99
1435--1615
78
2.3
78
80
3
204
25
20
27
25
1.99
9230--9492
40
6.6
40
88
3
325
24
20
27
26
1.99
9269--9527
80
3.3
80
85
3
256
25
20
27
25
1.99
13593--13686
43
2.2
43
83
7
111
24
25
19
30
1.98
16248--16302
29
1.9
28
96
3
101
30
29
20
20
1.97
20352--20459
29
3.8
30
78
8
100
24
32
16
26
1.96
20362--20471
58
1.9
57
85
9
152
25
31
15
27
1.96
20708--20767
24
2.5
23
76
7
66
8
18
20
53
1.70
28844--28890
17
2.8
17
75
12
51
53
2
0
44
1.12
28940--28973
7
4.9
7
85
0
50
50
0
5
44
1.26
28972--29041
10
6.6
11
75
15
58
40
1
0
58
1.07
28972--29041
21
3.3
20
71
15
61
40
1
0
58
1.07
31156--31331
27
6.5
27
85
3
210
30
27
14
27
1.95
31175--31330
82
1.9
81
89
3
242
30
28
14
26
1.95

Tables:   1

The End!