Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2555
Parameters: 2 7 7 80 10 50 1000
Length:  31754

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12746--12815
28
2.5
28
90
4
106
32
27
12
27
1.93
15938--16211
47
5.7
47
96
0
467
32
7
30
29
1.85
16330--16445
37
3.1
37
93
0
187
23
18
31
25
1.97
18337--18688
40
8.8
40
91
0
515
24
21
27
26
1.99
22193--22464
47
5.7
47
95
2
449
32
7
30
29
1.85
22581--22694
36
3.1
36
88
6
167
23
19
31
25
1.98
24540--24876
75
4.4
76
82
10
352
24
21
28
26
1.99
24540--24876
77
4.4
78
85
8
417
24
21
28
26
1.99
24540--24876
153
2.2
153
86
5
459
24
21
28
26
1.99
24540--24876
39
8.8
39
84
8
399
24
21
28
26
1.99
28332--28604
47
5.7
47
93
3
442
31
7
30
29
1.85
28332--28604
140
1.9
143
91
5
446
31
7
30
29
1.85
28332--28604
93
2.9
94
92
3
442
31
7
30
29
1.85
28718--28832
37
3.1
37
91
2
178
23
18
32
26
1.97
30713--31063
79
4.4
80
89
2
494
23
21
27
27
1.99
30713--31063
119
2.9
119
88
3
492
23
21
27
27
1.99
30713--31063
40
8.8
40
88
4
476
23
21
27
27
1.99

Tables:   1

The End!