Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold871
Parameters: 2 7 7 80 10 50 1000
Length:  32430

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3848--3899
25
2.0
26
92
3
88
44
17
5
32
1.72
4485--4548
30
2.2
30
88
8
96
35
23
15
25
1.94
8238--8269
4
8.0
4
100
0
64
25
0
0
75
0.81
9375--9473
30
3.3
30
78
2
110
28
27
15
29
1.96
11142--11172
12
2.6
12
100
0
62
74
6
6
12
1.21
11143--11182
12
3.6
11
90
6
55
72
7
5
15
1.24
12100--12156
11
5.5
10
73
22
55
77
1
17
3
1.00
12089--12156
21
3.2
20
80
12
66
76
2
17
2
1.04
12100--12156
5
11.0
5
77
17
55
77
1
17
3
1.00
12100--12156
16
3.7
14
80
17
60
77
1
17
3
1.00
12204--12234
12
2.6
12
100
0
62
45
12
16
25
1.83
12237--12261
12
2.1
12
100
0
50
76
0
16
8
1.02
12231--12286
18
3.1
18
79
5
60
69
1
19
8
1.24
12237--12318
30
2.7
31
84
5
114
64
0
21
13
1.28
14447--14688
47
5.1
47
86
2
281
34
10
28
26
1.90
14476--14547
22
3.1
22
64
24
58
33
13
29
23
1.93
14610--14794
48
3.8
49
87
7
261
36
5
25
31
1.80
14611--14794
98
1.9
96
88
4
280
36
5
26
30
1.80
14605--14815
48
4.3
50
81
12
238
34
6
27
31
1.83
14940--15047
37
2.9
37
91
0
162
24
17
30
27
1.97
20271--20540
63
4.3
63
77
7
237
31
21
8
39
1.82
20302--20538
124
1.9
125
82
4
300
30
22
8
38
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23663--23739
27
2.9
27
84
0
100
38
20
15
24
1.92
23634--23739
27
3.9
27
79
0
95
35
20
18
24
1.95
26936--27058
28
4.4
28
88
2
167
33
27
12
26
1.92

Tables:   1

The End!