Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1964
Parameters: 2 7 7 80 10 50 1000
Length:  27219

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
787--906
56
2.1
56
98
0
231
45
9
23
22
1.81
2031--2294
40
6.7
40
85
5
331
24
21
27
26
1.99
2031--2327
79
3.8
78
83
6
332
25
20
27
26
1.99
9257--9440
40
4.7
40
86
6
234
26
28
21
24
1.99
10557--10667
48
2.2
53
84
14
144
20
25
9
45
1.80
17029--17210
78
2.3
81
83
8
223
24
28
23
24
2.00
17008--17210
40
5.1
40
81
9
229
24
28
22
24
2.00
18339--18457
55
2.1
56
98
1
231
22
23
9
44
1.81
24885--25067
79
2.3
81
84
7
232
25
27
22
24
2.00
24864--25067
40
5.1
40
82
8
238
25
27
22
24
2.00
26195--26314
56
2.1
56
98
0
231
22
23
9
45
1.81

Tables:   1

The End!