Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1793
Parameters: 2 7 7 80 10 50 1000
Length:  27460

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2524--2571
14
3.4
14
85
0
60
18
31
6
43
1.75
4961--5034
37
2.0
38
86
2
105
21
32
20
25
1.97
7697--7799
12
9.2
11
80
15
88
68
3
4
22
1.25
7700--7763
11
5.4
12
78
10
62
73
4
3
18
1.14
7693--7796
30
3.1
34
79
18
110
69
3
5
21
1.26
7701--7796
11
8.6
11
76
15
58
71
3
5
19
1.18
10919--10975
11
5.5
10
73
22
55
77
1
17
3
1.00
10908--10975
21
3.2
20
80
12
66
76
2
17
2
1.04
10919--10975
5
11.0
5
77
17
55
77
1
17
3
1.00
10919--10975
16
3.7
14
80
17
60
77
1
17
3
1.00
11044--11125
30
2.7
30
76
14
80
63
1
20
14
1.37
16849--16883
13
2.6
14
91
8
56
60
5
2
31
1.35
17101--17141
21
2.0
21
85
0
55
41
17
19
21
1.90
17113--17157
20
2.2
21
88
4
65
35
22
22
20
1.96
17113--17167
20
2.7
20
82
2
56
34
20
23
21
1.97
19846--19883
17
2.2
17
100
0
76
60
7
5
26
1.46
19956--20052
30
3.2
30
77
2
106
28
16
26
27
1.97
20449--20806
179
2.0
179
90
3
569
23
25
22
29
1.99

Tables:   1

The End!