Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold842
Parameters: 2 7 7 80 10 50 1000
Length:  40852

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
491--520
16
1.9
15
93
6
51
20
3
33
43
1.68
2283--2433
27
5.6
27
95
1
248
26
13
29
30
1.94
2283--2433
82
1.9
81
91
1
248
26
13
29
30
1.94
2283--2433
55
2.8
54
93
1
248
26
13
29
30
1.94
10318--10469
27
5.6
27
93
3
241
26
13
28
30
1.94
10318--10469
55
2.8
55
94
0
259
26
13
28
30
1.94
15354--15402
18
2.6
19
78
18
57
22
2
2
73
1.04
15353--15402
22
2.3
22
83
10
66
22
2
2
74
1.03
17110--17156
20
2.3
20
81
0
58
29
34
12
23
1.92
19206--19254
18
2.6
19
78
18
57
73
2
2
22
1.04
22260--22306
25
1.9
24
86
4
67
51
10
19
19
1.75
32203--32253
26
2.0
26
96
0
93
29
35
23
11
1.90
32109--32331
103
2.2
104
92
2
369
31
31
18
17
1.95
32659--32722
30
2.2
29
81
10
76
29
28
6
35
1.82
32666--32722
30
1.9
30
85
3
80
29
24
7
38
1.82
39570--39621
26
2.0
26
92
0
86
28
34
21
15
1.94
39582--39732
72
2.1
71
91
2
241
30
29
16
23
1.96
39745--39795
26
2.0
26
96
0
93
29
35
23
11
1.90
39651--39873
103
2.2
104
92
2
369
31
31
18
17
1.95
40198--40261
30
2.2
29
81
10
76
29
28
6
35
1.82
40205--40261
30
1.9
30
85
3
80
29
24
7
38
1.82

Tables:   1

The End!