Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2816
Parameters: 2 7 7 80 10 50 1000
Length:  45482

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6644--6698
5
11.0
5
76
18
53
76
1
18
3
1.02
6637--6698
20
3.2
19
80
11
72
75
1
17
4
1.05
6751--6781
12
2.6
12
100
0
62
45
12
16
25
1.83
6784--6863
29
2.7
31
78
7
94
63
1
22
12
1.35
6796--6849
28
1.9
28
85
7
74
61
1
24
12
1.42
9054--9100
20
2.3
20
85
0
67
29
36
12
21
1.91
10453--10549
30
3.2
30
71
8
81
27
27
15
28
1.96
11192--11239
24
2.0
24
95
0
87
20
22
16
39
1.92
11430--11478
20
2.3
20
82
10
53
32
8
14
44
1.74
15655--15702
19
2.4
21
76
13
57
27
2
16
54
1.54
19106--19207
42
2.4
43
80
6
109
30
22
17
29
1.97
22153--22259
55
1.9
55
100
0
214
24
26
11
38
1.89
22316--22750
44
10.1
44
87
4
602
22
31
16
29
1.95
27774--27870
30
3.2
30
73
2
88
29
27
13
28
1.94
30028--30082
14
4.0
13
81
9
56
45
9
32
12
1.74
32781--32859
37
2.1
37
88
4
115
25
30
18
25
1.98
32979--33451
47
10.1
47
93
0
768
28
29
9
32
1.88
35139--35163
13
1.9
13
100
0
50
76
0
8
16
1.02
38429--38653
40
5.7
40
81
7
226
25
28
21
25
1.99
38585--38662
40
1.9
41
82
10
97
26
28
20
24
1.99

Tables:   1

The End!