Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2134
Parameters: 2 7 7 80 10 50 1000
Length:  35034

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6467--6675
40
5.3
40
81
5
255
24
20
27
26
1.99
6469--6675
79
2.6
79
81
6
249
24
20
28
26
1.99
11024--11248
48
4.9
48
72
13
168
28
26
20
25
1.99
15413--15610
43
4.6
43
74
8
134
31
23
15
28
1.95
15446--15610
86
1.9
85
82
7
208
33
24
15
26
1.95
17534--17711
27
6.6
27
79
3
115
28
28
16
26
1.97
17534--17711
54
3.3
55
80
10
204
28
28
16
26
1.97
17555--17710
82
1.9
81
85
3
215
28
28
16
26
1.97
25437--25614
27
6.6
27
79
3
115
28
28
16
26
1.97
25437--25614
54
3.3
55
80
10
204
28
28
16
26
1.97
25458--25613
82
1.9
81
85
3
215
28
28
16
26
1.97
28606--28761
27
5.7
27
79
7
138
26
16
28
28
1.97
28605--28783
54
3.3
53
75
10
155
26
16
28
29
1.97
28598--28783
82
2.3
81
77
3
194
26
16
27
29
1.97
28633--28783
27
5.6
26
75
11
90
26
15
28
29
1.96

Tables:   1

The End!