Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3221
Parameters: 2 7 7 80 10 50 1000
Length:  41830

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10686--10782
38
2.5
38
83
1
104
36
11
12
40
1.79
12274--12479
42
4.9
42
84
1
250
33
15
21
29
1.94
12276--12479
84
2.4
85
85
0
284
32
15
22
29
1.95
15306--15536
110
2.1
110
85
3
313
34
16
23
25
1.95
21737--21769
14
2.2
16
89
10
52
24
3
18
54
1.57
25204--25432
96
2.4
96
78
10
240
27
19
28
24
1.98
26425--26479
28
2.0
28
92
0
92
23
23
34
18
1.96
28543--28705
46
3.5
46
77
5
184
33
28
16
21
1.95
30137--30301
46
3.6
46
77
12
160
31
28
17
22
1.97
31716--31886
93
1.8
93
93
0
297
28
28
21
21
1.98
31711--31883
46
3.7
46
79
10
208
29
27
20
21
1.98

Tables:   1

The End!